P0016 + misfires

[tmontague]

To clarify, you currently are running my old "IKEA" 1nz in your QC Yaris NA or with the S/C?

I'm confused because you mentioned that a bunch of parts were swapped from my old engine but I'm not sure what engine they went on.

Based on your codes I would first check your timing. I'm assuming you have already been down that road so the next step would be checking all the wiring for the cam and crank sensors as well as vvti solenoids.

It sounds to me like there is a wiring issue causing the ecu to misinterpret some data and throw those codes and have the engine run rough.

Do you have a scanner that can look at live data pids? I'd be curious what your cam timing is on you intake cam compared to a known good reading.

The engine itself and all the parts attached to it ran flawlessly when I pulled it for my 2zr swap so you can confidently rule out a lot of those things. I wouldn't imagine that it sitting fir 6 years caused any of your issues.